Much of our software is disseminated on SimTk.org.
FEATURE code for identifying protein active and binding sites
GRAPE code for computing 3D structures from distance constraints
KNNIMPUTE for imputing missing data in microarray experiments
SAFA for rectifying and analyzing gels (for RNA footprinting primarily)
RIBOWEB knowledge base of experimental data related to the bacterial ribosome
In addition, PHARMGKB code is available upon request to firstname.lastname@example.org.